BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D10LP1|AL427622
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig964 1526 0.0
3x_Contig205 197 4e-50
>3x_Contig964
Length = 3868
Score = 1526 bits (768), Expect = 0.0
Identities = 789/796 (99%), Gaps = 1/796 (0%)
Strand = Plus / Minus
Query: 1 gatcctcacaaattttctttaatccaaytaaagtgtccaatgggtttgggaacacaccac 60
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 802 gatcctcacaaattttctttaatccaactaaagtgtccaatgggattgggaacacaccac 743
Query: 61 cttcaccttgttattggttccacaatcaacccagcagtcttttctttcaagctagaaact 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cttcaccttga-attggttccacaatcaacccagcagtcttttctttcaagctagaaact 684
Query: 121 tgttgatccaatttggtcagctcatcgttaatatttaaraattccactccgggaatcaaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 683 tgttgatccaatttggtcagctcatcgttaatatttaaaaattccactccgggaatcaaa 624
Query: 181 gaaccaaatggttcacgatattttggattactggtaacagacaaagcacccatggtacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaaccaaatggttcacgatattttggattactggtaacagacaaagcacccatggtacga 564
Query: 241 ccatgaaaagagttttggaacgcaattataccttgcttcgatgggctttttaggataccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccatgaaaagagttttggaacgcaattataccttgcttcgatgggctttttaggataccg 504
Query: 301 tatctcttggcgaatttcaatgcagcttcgttggcttcggtaccggaattacatagaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatctcttggcgaatttcaatgcagcttcgttggcttcggtaccggaattacatagaaaa 444
Query: 361 actctggatgcatcgtattgaccaccaaacgatttagtagcttccactagattttcactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 actctggatgcatcgtattgaccaccaaacgatttagtagcttccactagattttcactc 384
Query: 421 aacttcagacattcctcattatagtacaagttagaagaatggatcagtttcttactttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aacttcagacattcctcattatagtacaagttagaagaatggatcagtttcttactttgt 324
Query: 481 ttgtacatgatctcagccacttccggattggcatgtcccaaagcagttactgcgatacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgtacatgatctcagccacttccggattggcatgtcccaaagcagttactgcgatacca 264
Query: 541 gcagtgaaatcaatatattctttattgttaacatcatcataaagaatggcgttcttacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcagtgaaatcaatatattctttattgttaacatcatcataaagaatggcgttcttacct 204
Query: 601 ctagtcagaaccaaatgattaggtctggcataagtggttgcctggtatttttgtttatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ctagtcagaaccaaatgattaggtctggcataagtggttgcctggtatttttgtttatcg 144
Query: 661 actaaagattgcgacaatcttttagaagtgtgtgattgacggataactctcattattggg 720
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 143 actaaagattgcaacaatcttttagaagtgtgtaattgacggataactctcattattggg 84
Query: 721 ttaaagtatggaaggaagccttttcgaccggttcaatttgattatctaatgtagcgtaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttaaagtatggaaggaagccttttcgaccggttcaatttgattatctaatgtagcgtaca 24
Query: 781 ggatgcaggatactaa 796
||||||||||||||||
Sbjct: 23 ggatgcaggatactaa 8
>3x_Contig205
Length = 1544
Score = 197 bits (99), Expect = 4e-50
Identities = 107/109 (98%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 833 cctttattatctattcagatcaacttaccg-ttaagtgatatggttagcgatgagatttt 891
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1544 cctttattatctattcagatcaacttaccggttaagtgatatggttagcgatgagatttt 1485
Query: 892 tgaagaaacttcctaaatggaaatacttcacattgcagtatatatwaag 940
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1484 tgaagaaacttcctaaatggaaatacttcacattgcagtatatataaag 1436
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7117
Number of Sequences: 1807
Number of extensions: 7117
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 2
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)